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MicroBinfie Podcast, 79 StaPH-B Stable containers for public health bioinformatics

Released on April 14, 2022

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StaPH-B Containers for Public Health Bioinformatics

Dr. Erin Young from the Utah Department of Health and Dr. Kelsey Florek from the Wisconsin State Laboratory of Hygiene join us to discuss StaPH-B containers for public health bioinformatics. It's essentially about making biology easier for everyone!

About StaPH-B

StaPH-B, which stands for State Public Health Bioinformatics, is a collaborative effort to streamline and enhance bioinformatics workflows in the realm of public health. The use of StaPH-B containers can significantly simplify the complex processes involved in bioinformatics, making these advanced scientific techniques more accessible to public health professionals.

Key Features of StaPH-B:

  • Containerized workflows that facilitate easier deployment and sharing of bioinformatics tools.
  • Focus on public health applications, addressing the unique needs and challenges faced by state health laboratories.
  • An open-source community that encourages collaboration and sharing of resources among public health laboratories.

You can explore more about StaPH-B and access their resources on GitHub: StaPH-B GitHub Repository.


For further inquiries or collaboration opportunities, feel free to reach out to Dr. Young or Dr. Florek via their respective departments.

Episode 79 transcript